Handbook of molecular microbial ecology II metagenomics in different habitats

ÍNDICE: Preface. Contributors. 1. Introduction (Frans J. de Bruijn). Viral Genomes. 2. Viral metagenomics (Shannon Williamson). 3. Methods in Viral Metagenomics (Thurber). 4. Metagenomic contrasts of viruses in soil and aquatic environments (Eric Wommack). 5. Biodiversity and biogeography of phages in modernstromatolites and thromolites (Christelle Desnues). 6. Assembly of Viral Metagenomes from Yellowstone Hot Springs Reveals Phylogenetic Relationships and Host Co-Evolution (Thomas Schoenfeld). 7. Next-generation sequencing and metagenomic analysis; a universal diagnostic tool in plant pathology (Ian Adams). 8. Direct Metagenomic Detection of Viral Pathogens in Human Specimens Using an Unbiased High-throughput Sequencing Approach (T. Nakaya). The Soil Habitat. 9. Soil based Metagenomics (R. Daniel). 10. Methods in Metagenomic DNA, RNA and Protein Isolation from Soil (P. Gunasharan). 11. Soil Microbial DNA PurificationStrategies for Multiple Metagenomic Applications (Mark Liles). 12. Application of PCR-DGGE and metagenome walking to retrieve full-length functional genes from soil (Morimoto). 13. Actinobacterial diversity associated with Antarctic Dry Valley mineral soils (Cowan). 14. Targetting major soil-borne bacterial lineages using large-insert metaenomic approaches (G. Kowalchuk). 15. Novelty and uniqueness patterns of rare members of the soil biosphere (M. Elshahed). 16.Extensive phylogenetic analysis of a soil bacterial community illustrates extreme taxon evenness and the effects of amplicon length, degree of coverage, and DNA fractionation on classification and ecological parameters (Holben WE). 17. The Antibiotic Resistance: Origins, Diversity, and Future Prospects (GerardWright). The Digestive Tract. 18. Functional Intestinal Metagenomics (MichaelKleerebezem). 19. Assessment and improvement of methods for microbial DNA preparation from fecal Samples (M. Hattori). 20. Role of dysbiosis in inflammatory bowel diseases (Johan Dicksved). 21. Culture independent analysis of the human gut microbiota and its activities (Kieran Tuohi). 22. Complete genome of anuncultured endowsymbiont coupling nitrogen fixation to cellulolysis with protest cells in termite gut (Hongo). 23. Cloning and identification of genes encoding acidic cellulases from metagenomes of buffalo rumen (Feng). Marine and Lakes. 24. Microbial diversity in the deep seas and the underexplored rare biosphere (David Mark Welsch and Susan Huse). 25. Bacterial Community Structure andDynamics in a Seasonally Anoxic Fjord (Steven J. Hallam). 26. Adaptation to nutrient availability in marine microorganisms by gene gain and loss (A. Martini). 27. Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities (Jack Gilbert). 28. Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a lacustrine ecosystem (Didier Debroas). 29. Metage

• ISBN: 978-0-470-64719-6
• Editorial: John Wiley & Sons
• Encuadernacion: Rústica
• Páginas: 632
• Fecha Publicación: 22/07/2011
• Nº Volúmenes: 1
• Idioma: Inglés